For positive control datasets, error-free reads (101, 76, and 50 nucleotides) were created for each in silico generated CDR3, with the center of the CDR3 region positioned at the center of the read.
As with all routinely collected datasets, errors associated with participant recall (outcomes in relation to the timing of the event), data collection, coding and entry are likely to have occurred, including for the PDC.
Besides, we only considered the utterances from positions P01, P02, and P05, because these three positions and microphone A were in-line and the speakers' utterances were directed to microphone A. Table 5 Experimental results on the use of modified multiple NNs configuration for known positions (matched conditions) Method Dataset Error rate reduction P01 P02 P05 Avg.
If a dataset is taking longer to process than expected, potentially due to server load or a dataset error, an error message will be presented.
In this case, the rate of 0.9% in mismatch between stage and extraprostatic extension was reassuringly lower than the overall manual entry dataset error frequency, and was also lower than the generally cited rate of 1.4% error for prostate pathology.
In total, (A) 64 recurrence-associated pathways from our HBV-HCC dataset (log-rank p-value < 0.01 in the testset) were compared with 84 tumorigenic pathways from another HBV-positive HCC dataset (error rate < 0.1), and (B) 32 recurrence-associated pathways from public HCV-HCC (log-rank p-value < 0.01 in the testset) compared with 138 tumorigenic pathways from the same dataset (error rate < 0.1).
As can be seen from the results in Table 1, OPTIMA reports alignments with very high precision, greater than 99%% in most cases, independent of the genome size and the dataset error rate.
Open Context uses Git and Mantis Bug Tracker to track and correct dataset errors.
Thus, any apparent rate variation in these datasets reflects error in rate estimation rather than true differences in the underlying substitution process.
In all datasets, the error rate and insert distance were set to 1% and 250, respectively.
Such estimation needs to take into account potential differences in noise levels in the two datasets through error variance scaling.
