Sentence examples for datasets being removed from inspiring English sources
This has resulted in a significant policy change, with some existing datasets being removed from the internet.
To overcome sampling bias between GOS datasets, poorly sequenced datasets were removed (e.g. GS113: 718 reads, GS114: 9741 reads) and each remaining dataset was randomly resampled to the size of the smallest remaining dataset (GS120 - 46,052 sequences) using the daisychopper (http://www.genomics.ceh.ac.uk/GeneSwytch/Tools.html) tool.
Further evidence for this was given by the comparable performance of both platforms for overall samples and those in each subclass shown in Figure S2, where the 100 control datasets were removed and only the 318 treated samples were retained in the AFX dataset.
Additionally, redundant probe sets representing genes found to overlap between datasets were removed from the Se toxicity set.
Redundant patients (74 samples) present in KJX64/KJ125 and Uppsala datasets were removed from the validation tests so they were only considered once.
High levels of noise inherent to most biological datasets are removed first, and the true signal is further amplified for enhanced data interpretation.
Furthermore, redundant patients present in KJX64/KJ125 and Uppsala datasets were removed from the validation tests so they were only considered once.
Batch effects within and between the CCLE, CGP, and NCI60 datasets were removed using the ComBat function from the R 'sva' package [ 10].
Note that any substrings and repeated sequences of these datasets were removed via the cd-hit algorithm [ 39] (with options -n 5 -c 1) prior to this study.
Note that although some hyperparameters in MADGIC were estimated using COSMIC data (see Section 2.2.3), the TCGA ovarian and lung datasets were removed prior to estimation, and no information regarding the list of drivers in Vogelstein et al. (2013) was used.
