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The different datasets are expressed in different units (tons or TEU) and different extrapolation methods have been used to convert the sample into the final dataset.
Our results suggest that the combination of high-throughput sequencing datasets allows the identification of novel miRNAs that in the individual datasets are expressed at close to noise levels.
Firstly, the results for each classification built from training datasets are expressed in terms of a classification accuracy rate, which represents the similarity between the pathological clinical diagnosis and the microarray diagnosis [ 14].
While our tests of the performance of SDhaP on real datasets are expressed only in terms of the MEC scores, for the simulated datasets we know the ground truth and therefore characterize the performance of SDhaP in terms of both MEC and switch error rate (SWER).
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The sum of t-scores from the actual datasets were expressed as standard deviations from the mean of either the Q1 permutation results or the Q2 permutation results, with two-sided significance p-values determined assuming normal distributions of the permutation results.
Normalized weights calculated for each imputed dataset are expressed by w m δ = w ˜ m δ ∑ k = 1 M w ˜ k δ.
For the jth fold, the test dataset is denoted as S j and the training dataset is expressed as S −j =S−S j.
At the individual level, the inter-voxel functional connectivity of an individual fMRI dataset is expressed as the temporal coherence in the rest recorded BOLD time-series.
The degree of enrichment against the GOA dataset was expressed as fold accumulation.
A close homolog of that gene (~91% identical at the nucleotide level) and represented by unigene OlR_092835 in our dataset was expressed in all red rice tissues examined and may be partially responsible for resistance in red rice.
A customized gene array panel was developed to more cost-effectively assess whether the differentially responding genes observed from the microarray dataset were expressed in the WBC population, remained differentially expressed following exposure to α-particle radiation and were responsive to X-ray exposures.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com