Sentence examples for dataset was determined using from inspiring English sources
The most appropriate model of nucleotide substitution for each dataset was determined using jModelTest v0.1.1 [78].
The overall ML tree topology for each gene and the concatenated dataset was determined using GarliV0.951 [61] with model parameters as estimated by Modeltest.
Significant overrepresentation of particular GO terms in the dataset was determined using the software GeneMerge with corrections for multiple tests [50].
To highlight the differences in transcriptional profile of each tissue of M. galloprovincialis the similarity between the contiguous sequences from each dataset was determined using an all-against-all BLASTN analysis (Table 2).
Variance across the dataset was determined using the Levene test (17 ).
The region overlap between the NKX2-5 and MEIS dataset was determined using Galaxy (Goecks et al., 2010).
The dataset was originally prepared using the following criteria: all the structures in this dataset were determined using X-ray crystallography with resolution ≤2.0 Å, R-factor ≤0.25 and R-free factor ≤0.25; sequence length should be greater than 60 amino acid residues and without any chain breaks; each two sequences have sequence identity less than 30%.
It should, however, be taken into consideration that many structures in our dataset were determined using only a fraction of the actual binding partner, allowing for more flexibility in the protein's termini, which would be restrained in the full protein.
Normality of datasets was determined using the Student's t-Test.
The number of identical sequences between these datasets was determined using a Perl script and divided by the sum of number of complete transcripts in both datasets.
Subsequently, an age-regulation of mRNA profiles in each of the datasets was determined using the globaltest[ 19] where the p-value calculation assumes no-age association as the null hypothesis.
