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Similar findings were observed in all multivariable regression models conducted on the imputed dataset: memory impairment was associated with significantly poorer self-care, and impairment in executive function was associated with better self-care (data not shown).
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The running time is the total time taken by the assembler to complete the assembly process for a given dataset, whereas memory consumption is the maximum amount of memory used during the entire execution period.
Stata programmes has been written in 'do' files which (1) sequentially load datasets in memory; and for each dataset (2) sequentially retrieve the information for each variable of interest from '_Structure.dta'1Sub0_Datasetsvarsars.do' in additional file 1).
However, MPI process loads the whole dataset into memory during learning tasks, making it wasteful.
It is apparent that both the subset size and the size of the dataset increase memory consumption.
This sequential learning mechanism works well for big data as current machines cannot hold the entire dataset in memory.
For the same dataset, the memory footprint increases only sublinearly from 2.6 to 8.0 GB.
VARIANTSPARK scales to data sizes that are not feasible to process using R or Python due their requirement to load the whole dataset into memory.
This approach allows us to provide maximum functionality instant access to any portion of the data; extremely fast and high-quality rendering; entire dataset overviews yet memory usage is kept relatively low.
GSNAP used a peak of 86 MB on the exact match datasets, 101 MB on the mismatch datasets and 170 MB on the indel datasets, with memory usage varying from read to read.
To reduce the time spend reading, writing and transferring data, it forms datasets in memory.
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