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The pk168 dataset is compiled from PseudoBase (van Batenburg et al., 2001), which includes 16 categories of pseudoknots.
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The dataset was compiled from the NCBI nucleotide database using curation steps designed to exclude incomplete plasmid sequences, and chromosomal sequences misannotated as plasmids.
To achieve these results, a large proxy series dataset was compiled from public databases or collaborations.
A modern dataset was compiled from professional and amateur samples made between 2000 and 2009, the majority being collected in 2009 by volunteers participating in the Evolution MegaLab.
Studies published in duplicate were included once but a comprehensive dataset was compiled from all publications.
A dataset was compiled from all 31-day intervals contributed by each patient.
The sequence dataset was compiled from oligosaccharide-binding proteins all identified from previous works or from the current study (Table 4).
Our dataset was compiled from the records of inpatients who received FFP across more than 600 hospitals in the year 2010.
Information on these traits for the 25 species in the genetic dataset was compiled from the literature, following the criteria outlined in Alsos et al. (2012); [see Supporting Information—Table S1 ].
The 68 holometabola mitochondrial genome dataset was compiled from previously published data across the 6 major holometabolan divisions: Diptera [ 60- 74], Lepidoptera [ 33, 75- 81], Hymenoptera [ 39, 82- 87], Coleoptera [ 88- 93], Neuropterida [ 34, 94, 95] and Strepsiptera [ 28].
The dataset was compiled from IEDB; we obtained 4483 MHC II binders or epitope that induce IFN-gamma only and 2160 epitopes which induce cytokines other than interferon-gamma.
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