Sentence examples for dataset insertion from inspiring English sources
No performance evaluation has been carried out to compare all three storage strategies, hence, this paper reports on the first attempt to evaluate all three storage strategies by using open source products to measure the response time taken for each of the database basic tasks such as database creation, dataset insertion, and data manipulation.
However, the majority of individuals are represented in the majority of datasets: each insertion dataset contained ∼20 lines on average (see Dataset S1 in Dryad: Ellison and Bachtrog, 2015).
As no other tool was able to assemble long insertions, we could not assess whether our results were owing to weaknesses in our method, or to specificities of this particular dataset (complex insertion sequences or mispredicted insertions).
Alleles representing gaps were not included in this dataset because insertions and deletions are the most common form of 454 sequencing error [ 70] and generally cause frameshift mutations in coding sequence (such as cDNA sequencing) and are therefore less likely to be true sequence variants.
Only a small minority of the proteins in the dataset had short insertions relative to engrailed.
The resulting SV dataset included INS (insertions), DEL (deletions), ITX (intrachromosomal translocations), INV (inversions) and CTX (interchromosomal translocations) ranging from 10 bp to 1 Mb.
Our classifier for insertions is trained on a dataset including 43 true insertions.
As we did not find any validated dataset of known large insertions for this genome, we simulated insertion variants following the protocol of simulated data: 1000 regions of a given size (here 1 100 bp or 1 kb) were deleted in the reference genome, corresponding to homozygous insertion variants in the N2 donor genome.
To our knowledge, this is the only dataset for mobile element insertion annotations from the genome of a single individual.
Analysis coverage is calculated from quality filtered reads and this dataset is used for insertion site discovery.
We have tested the optimal tag sequence length and percentage threshold using a dataset of 1920 PiggyBac insertion site sequence reads (Wang et al., 2008).
