Sentence examples for dataset filtering from inspiring English sources

A complex BioMart query is decomposed into four steps: choice of the dataset, filtering of the dataset to select only the proteins with the desired properties, choice of the attributes to be displayed with the output, which will usually be different from the properties used for the query and data retrieval.

GEIRA consists of six steps which are described as follows (Fig.  1): Step 1 (Data importing) Here we assume that some other software package has previously been used to quality control genome-wide genotype data, including dataset filtering on the basis of SNP genotype call rate, minor allele frequency, Hardy Weinberg equilibrium, individual missing genotype, outliers, etc.

Figure 5 shows the accuracies of MixSIH, ReFHap, FastHare, and DGS for each dataset: filtered with cluster length and heterozygous calls (filtered); further filtering with CSP (filtered+CSP).

A T2D causal SNP combination is detected using RF with variable selection from an optimal SNP dataset filtered with a p-value threshold and LD pruning.

The significance of the association between the dataset filtered by these thresholds and the IPA functions was calculated by IPA using a Benjamini-Hochberg's FDR ≤ 0.01 using the mapped genes on our microarray as background.

It offers functionality to perform many common cheminformatics tasks suchas combining datasets, filtering by molecular properties, and visualization using abuilt‐in 2D engine.

Two lists of human genes were built; the first contained orthologs between human and mouse datasets filtered to exclude the orthologous genes of cow and the second by the orthologs between human and dog datasets, filtered to exclude the orthologous genes of cow.

Hierarchical clustering and principal-component analysis (PCA) was conducted on datasets filtered for mean expression values greater than 100 in any population (Mingueneau et al., 2013), with elimination of noisy transcripts with an intra-population coefficient of variation (CoV) <0.65.

Additional experiments on datasets filtered to remove members from the same SCOP superfamily and a second case study on Escherichia coli Asparagine Synthetase (PDB id:12as) are reported in the Supplementary Materials (Section S-5.1).

Gene expression for type 2 interferon and its receptor (IFN-gamma receptor, IFNGR) were found in the microarray dataset after filtering non-expressed genes (not shown).

For this analysis we used the "CSF fluid" as the dataset filter and a 1.5-fold change in protein abundance as a cut-off value.