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Twenty one IFABP protein sequences, sixteen of which from fish databases, were retrieved from the NCBI database (http://mirrors.vbi.vt.edu/mirrors/ftp.ncbi.nih.gov/blast/db/).nih.gov/blast/db/
A total of 21 databases were retrieved from Ensembl (http://www.ensembl.org/info/data/ftp/index.html) and NCBI databases (http://mirrors.vbi.vt.edu/mirrors/ftp.ncbi.nih.gov/blast/db/), respectively, and were used to perform BLAST analyses for EST annotation (Supplementary Tables S2 S5).
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The gene sets predefined in the database were retrieved from various sources.
Other survival endpoints not available in the clinical database were retrieved from hospital records.
The names for all of the miRNA sequences included in the current database were retrieved from miRBase version 21 [ 51].
Data for ICU-LOS and data on mortality that could not be extracted from the local ICU database were retrieved from the hospital information system.
While about 222 gene-sets in the database were retrieved from literature, 156 of them had less than 500 genes per set.
In addition, data about the usage of certain tags in the OSM database are retrieved from Tag History (http://taghistory.raifer.tech).raifer.tech
The DEG 6.8 database was retrieved from http://www.tubic.tju.edu.cn/deg/.
The HapMap SNP database was retrieved from its repository (http://hapmap.ncbi.nlm.nih.gov).nih.gov
The NCI database was retrieved from the NCI download site (dtp.nci.nih.gov/docs/3d_database/Structural_information/structural_data.html) and converted into a 3D database using Catalyst 4.11 software (www.accelrys.com).
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