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Segmental duplication analysis was done with the RGAP rice segmental duplication database with the maximum length distance permitted between collinear gene pairs set to be 500 kb.
to enrich the PathoLogic file (and consequently the BioCyc database) with the maximum information available; to filter out undesired information from the BioCyc database (e.g. inconsistent or untrusted EC and GO annotations); and to easily update the generated BioCyc database every time new annotation data become available.
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So far, 1538 PFS events (83%) and 1174 deaths (64%) have been recorded in the database, with a maximum follow-up period of more than 10 years.
At each step the reads were matched to an annotated database with a maximum of two mismatches.
The rbcL, matK, psbA -trnH, and ITS2 sequences of the non- Camellia teas were also blasted against the NCBI database with maximum identity that are greater than 95% using an e-value below 0.0 to determine the difference between the original plants.
On the other hand, when using the extensive non-redundant vertebrate database as reference, the maximum number of contigs annotated within a single library was 58,404, 3072 contigs more than with the OMA database (Additional file 1: Table S4b).
For small database sizes (D<5000), the maximum scores lie in the 0.2 0.4 interval.
Each drug database made significant contributions to therapeutic target identification, with the maximum contribution from DrugBank (173), followed by TTD (57) and PharmGKB (15).
For multiple ORFs from the same transcript, we defined the primary transcript as the one with the maximum number of significant hits to NCBI nr database.
This provides users with the maximum amount of uptime that it provides by helping developers create databases across three AWS EC2 boxes in three different availability zones.
The resulting experimental database enabled the mathematical processing and the determination of the nature of the dependence equations (linear, logarithmic, exponential or polynomial) with the maximum correlation coefficient.
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