Sentence examples for database were identified by from inspiring English sources
The putative PK sequences in the grapevine genome database were identified by HMMER and aligned to the Pfam kinase domain.
Relevant studies from the database were identified by their titles and abstracts.
The closest completed genomes available in the database were identified by phylogenetic analysis (Additional file 3).
Mas homologs in the M. smegmatis genome, which was not covered by the NCBI database, were identified by exhaustive BLAST querying of the TIGR proteome.
Conserved SOX9 consensus binding sites, defined by the Transfac database, were identified by comparing the human genome with that of mouse or dog using rVista [ 26].
As a second step, 65 potential welfare indicators, based on register data in a national dairy database, were identified by expert opinion.
Every record in the database is identified by the unique sample ID.
The table shows that the majority of reads labeled by LMAT using the kFull database are identified by species (74.2% for the full database) with high accuracy.
By using a mapping scheme, product proteins, so-called disease proteins corresponding to the disease genes in the OMIM database, are identified by UniProt protein IDs.
The best match for each sequence with KOG database was identified by Kognitor – a BLAST-based web server that search within KOGs only – and validated by independent PSI-BLAST searches [ 51].
Each protein obtained from the IntAct database was identified by a unique UniProt accession number, which enabled a fast collection of GO annotation data from the Uniprot Retrieval System [ 37, 41] (Uniprot protein data obtained on Oct. 1st, 2007).
