A non-redundant list of the databases was assembled and used to construct a presence-absence matrix consisting of rows of UniProt protein identifiers and columns of selected databases.
A total of 268,168 apple EST sequences, including those described by Newcomb et al. [ 17], and those deposited in the GenBank database, were assembled into contigs and preliminary annotation performed by sequence homology (blastx v. Arabidopsis proteins [ 34]).
To summarize, novel polypeptide sequences deduced from A. viridis EST database were assembled into several families with members differing by point mutations.
The database search results were assembled and filtered using the DTASelect program with a spectra level false discovery rate of less than 0.5%, mass accuracy of 5 ppm.
The database search results were assembled and filtered using the DTASelect program (Tabb et al., 2002) requiring a protein level false discovery rate less than 1%, all peptides identified are required to be tryptic, and at least two peptides are required for a protein to be identified.
Then, an updated database is assembled from previous and recent test results of rectangular CFT columns subjected to eccentric axial loads to evaluate whether the existing provisions and/or stress-strain models for concrete can be used.
Moreover, a relatively large sky database is assembled for model training and evaluation of the detection algorithm.
The main contributions of this work are two-fold: First, a dual-band database is assembled that consists of visible (baseline) and mid-wave IR left and right profile face images.
23 This database is assembled annually by the Agency for Healthcare Research and Quality and provides information on more than eight million annual admissions from more than 40 states and more than 1000 hospitals.
Also, since the BmiGI database was assembled from ESTs, 5' gene promoter regions and sequences downstream from the polyadenylated 3' end are absent.
