Sentence examples for database was scanned from inspiring English sources

The UniProtKB database was scanned using HMMsearch limiting the search to eukaryotes only.

Since most sequences did not map against PMRD, the Hevea EST database was scanned using the LeARN pipeline.

HMMprofile was prepared using hmmbuild and the UniProtKB database was scanned using hmmsearch from the HMMER package [ 37].

Since MUC5B mucins were degraded by biofilm cells of L. fermentum, the genome database was scanned for proteases capable of degrading glycoproteins.

The PiceaGenExpress database was scanned to obtain evidence of RNA transcript production, which is the first step for LTR retrotransposon mobilization.

For this analysis, the entire set of the mouse mRNA database was scanned with the PWM-based Perl program to identify YY1 binding motifs.

Often substructure search algorithms are used in database search scenarios in which a database is scanned for all molecules that contain a given query structure.

The entire database is scanned within the application, and a bitwise comparison is performed using the selected similarity metric (Tanimoto coefficient by default).

Unigenes that could not be aligned with any database were scanned by ESTScan [ 45].

Altogether, more than half of the stress treatments included in the signature database were scanned by independent query signatures.

Unigenes that could not be aligned to any database were scanned with ESTScan [ 22] to produce the nucleotide and amino acid sequences of the predicted region.