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Similar to the analyses performed for protein-coding genes, the number of human-specific TF-binding sites with genomic coordinates within a relative proximity to lncRNA gene boundaries defined in the hg19 reference human genome database was calculated for each lncRNA.
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Gene expression levels based on the analysis of EST database were calculated for 57 different human tissues.
The corresponding exons of armadillo (2 × coverage), rabbit (2 ×), cat (1.87 ×), elephant (2 ×), cow (7 ×), and human (Genome Reference Consortium GRCh37 assembly) were isolated and the numbers of nucleotide substitutions between the sequences of cDNA and the genome databases were calculated for each species using MEGA software [ 35].
Values for 'available carbohydrates' in the database were calculated from the amount of total carbohydrates calculated 'by difference' after subtraction of dietary fibre content.
The phylogenic tree for the tissues in the reference database was calculated as follows: the density estimates for a gene in one tissue was compared to the density estimate for the same gene in another tissue.
Using the matching scores and the stolen biohashes, local binary biohashes corresponding to the local face database were calculated, which were used for iterative perceptron learning to estimate the projection parameters.
Lift method Lift [ 46] was calculated for the database containing all the possible combinations in SI versus W and SR versus W. Finally, the ratio of both was calculated to find out the enriched motif of SR with respect to SI. Motif enrichment (OE) method The expected occurrence of a particular hexameric motif was counted by the method used for counting W-Box and TGA motifs.
The ranges of cumulative values for each database are calculated.
At the last step, the ranges of cumulative values for each database are calculated.
The bacteria were then sorted with SEQCART in the RDP database, and the percentage of failed detections was calculated for each bacterial phylum.
Additionally, p I values of all potential proteolytic peptides for every protein inside a protein FASTA database are calculated.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com