We have established a comprehensive data repository for variant annotation including all of the publicly available databases, to our knowledge, for non-disease or disease-related variants.
Using RNA-seq data for different bacterial genomes, the developed database, which to our knowledge is the largest of its kind to date, should facilitate to researchers navigating through operons predicted under different experimental conditions.
The 'Benchmark Energy and Geometry Database' (40) which, to our knowledge, is the only other database that provides interaction energy related information, covers only some selected base pairs and stacks.
In this moment, 2200 images are already in our database, which is, to our knowledge, the largest in Europe.
One expansion, however, contains over 100 members of unknown function and no homologs in any database, which is to our knowledge the largest gene family described in yeast.
The results of this characterization have been organized in a public database which represents to our knowledge the first large amount of information of a sturgeon transcriptome.
With regards to the number of databases or screen datasets incorporated, to our knowledge, no published database is comparable to CrossCheck, as even the largest monotype database, such as BioGRID, currently amounts to only 49986 entries, while CrossCheck currently consists of 614,161 entries.
We aim to develop and maintain a comprehensive plant tandem duplicated genes database to improve our knowledge of functional genomics, comparative genomics, and evolutionary biology by providing systematic data resources and integrative analytical frameworks and views.
While there are a number of pathogen- or disease-specific sequence databases, e.g. PlasmoDB (Bahl et al., 2003) and the Los Alamos HIV Database (Hraber et al., 2007), to our knowledge there is no database specifically dedicated to antigenic variation that encompasses multiple taxonomic groups.
To our knowledge, this database represents the largest gut-specific EST database from a lepidopteran pest.
