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The MLST sequence types for each of clonal groups 1 to 6 that had been described before in the E. coli MLST database suggest that these clonal groups may circulate not only in Colombia but also in other geographic regions.
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However, the observed MAFs of the other three SNPs, not available in the HapMap database, were dramatically different from those obtained from the EGP database, suggesting that indeed these SNPs may have some ethnic differences in their MAFs.
These summary probabilities derived from the population-based prospective database suggest that the risk of death among those remaining untreated increases with time on wait lists.
Taxonomic coverage rates of 100% (SI Appendix: Section 1c,d) across all metazoan sequences for phyla in the SILVA SSU database suggest that the barcode designed for nematodes is degenerate enough to be used as a general primer for subkingdom Metazoa.
So far, HS1 homologues have been reported in human [ 27], mouse [ 33], rat and chimpanzee (NCBI database), suggesting that HS1 exists in mammalians only.
BLAST searches of these sequences against HOMD database suggested that these were valid sequences that RDP Classifier failed to classify [ 23].
The highly cooperative expression of ACR11 and GLN2 observed in our experiments and in the database suggests that these two genes may belong to the same functional module.
The counterpart of PTPN22.2 is also present in rhesus monkeys and chimpanzees, according to NCBI Gene database, suggesting that these alternative splicing events are evolutionarily conserved.
The eQTL associated with most of these genes occurs in dura only, or is not significant in the gTEX database, suggesting that these eQTLs may be related to CMI.
BLASTX analysis of three additional ESTs, Pp3394, Pp3734, and Pp3842, did not find any significant similarity to any entries in the NBCI non-redundant protein database, suggesting that these transcripts represent genes specific to P. pachyrhizi.
Furthermore, 1176 of the genes predicted in the Jatropha genome assembly had matching sequences only in the Jatropha cDNA database suggesting that these genes are specific to J. curcas.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com