Sentence examples for database subdivision from inspiring English sources
Genes disrupted by IS element insertion events were identified by BLASTX using the two sequences flanking each IS element as queries against non-redundant protein database subdivision of GenBank [ 45] with an e-value cutoff of 10 -5.
BLAST2GO program [ 57] and specific BLASTP searches of dubious enzymatic activities against specific entries of non-redundant protein database subdivision of GenBank, to avoid functional over-assignments, were used to complement KAAS pathway reconstruction in order to predict mutifunctional enzymes associated with more than one EC number that were not identified with KAAS.
The database is a flexible, updated subdivision of construction phases and building components, creating a friendly interface suitable for non-specialist users, where they can find specific spread sheets of products and construction systems.
Finally, individual BLASTP and FASTA searches were carried out with all S. glossinidius CDSs against bacterial subdivision of Uniprot database [ 51] and additional functional data were provided by individual searches of each S. glossinidius CDS against protein domain databases such as PFAM and Prosite [ 52].
These assembled contigs were then searched against both Arabidopsis TAIR7 and viridiplantae subdivision of NCBI protein database with e-value cutoff of 1e-10, to find their homologues using BLASTX program.
The final contigs were subjected to BLASTX search against the green plant subdivision of the NCBI nr protein database and/or the Arabidopsis protein (TAIR9) databases to search for similarity to previously identified genes and assign possible gene functions.
The parallelization of the Blast searches is done as follows: in a first step, each compute node aligns the query sequence against a distinct subdivision of the selected sequence database using the specified BLAST program.
The image database is very heterogeneous, with no categorization or subdivision in classes, and the images were stored in the same way they were collected, with no post-processing or dimension reduction.
The resultant contigs were then annotated with a translated BLAST against the TAIR7 and the viridiplantae subdivision of the NCBI nonredundant protein databases.
The smallest number of alignments was identified in the hypothetical protein subdivision (7% to 10% for the monocot databases and < 0.05% for the dicot databases).
As only aggregated results (per civil parish,1 a municipality subdivision) were available, a non-official goods establishment database was also used [26].
