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Then the database screening and refinement are performed.
This is substantially different from methodologies that depend on database screening to get new drug candidates.
Fig. 10 The schema of database screening of ISC and PBISC which used neighbor classification method.
The generated pharmacophore hypotheses were successfully employed as discriminative probe for database screening.
The validated pharmacophore was utilized in database screening to identify potential hits.
We have previously identified embelin as an inhibitor of XIAP through computational structure-based database screening.
Interestingly, CDK FP required approximately 8-fold more time on training prediction models and database screening than MACCS.
Including a large amount of similar references in structure decreases the search efficiency in iterative database screening.
Identifying a potential lead molecule requires database screening, and this becomes rate-limiting once the database becomes too large.
The best pharmacophore model was validated using four different strategies and then used in database screening for novel virtual leads.
The method combines pharmacophore perception and database screening with protein ligand energetic terms computed by the Glide XP scoring function to rank the importance of pharmacophore features.
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