Sentence examples for database pipeline from inspiring English sources

The design of these tables also reflects the different stages of the BioModels Database pipeline.

The BioModels Database pipeline manages all models from their submission to their publication.

The BioModels Database pipeline, which encompasses the curation and annotation processes, ensures the correctness and quality of the models.

Filtering and banding techniques for RNA search can be based on sequence-only or sequence-and-structure models, but one common approach is a sequence-only filter such as the BLAST filter used in the Rfam database pipeline (Gardner et al., 2011).

Similar results were obtained when the RDP database pyrosequencing pipeline was used, which classified 16,768 reads (94%, Additional file 1).

Major modules of the database construction pipeline include the following three steps.

TPLS contributed to all phases of algorithm, database and pipeline development as well as overseeing FLIC sequencing.

As such, we hope this database and pipeline will provide one part of the solution to reproducibility in high-dimensional genomic research.

dbCRY was developed by taking the advantage of a three-tiered system, divided into the database, identification pipeline and Web interfaces.

dictyBase and TAIR curators specify the publications that are relevant to their database curation pipeline, and then Textpresso processes the associated PDFs for full-text markup and indexing.

Given a set of nucleic acid sequences and the array of reference methods in the GMOMETHODS database, the pipeline sequentially performs the tasks listed below: In silico PCR simulation on the whole sequence collection with the primers pairs of the reference methods, by running e-PCR (16 ), a tool developed at NCBI and installed locally.