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The Meta-data Manager (MM) implementation provides decoupling of database and transaction manager and it also provides mapping of distributed database partitions into OLTM.
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Figure 7 Database partition.
Database Partitioning: Database partitioning is generally divided into horizontal partitioning and vertical partitioning [25].
Table 1 Database partitioning procedure for each cross validation run.
We describe the differences in more detail by first describing some related work in application partitioning and then database partitioning.
It changes the database partition size depending on the cluster size of Hadoop and the number of input query sequences.
Our focus is not on providing all of the many features provided by every previous project either on application partitioning or database partitioning.
Our research bridges the two areas of application and database partitioning but differs from previous work in that it uses a new BIP formulation that considers both areas.
It is a hybrid "virtual partitioning" approach that automatically adjusts the database partition size depending on the Hadoop cluster size as well as the number of input query sequences.
Software applications for sequence database partitioning, guide tree estimation, molecular classification and alignment acceleration have benefited from embedded k-mer searches as sub-routines.
From the Galaxy2ENCODE (GENCODE) data sets available on the Galaxy database, partitioned intervals representing the ENCODE region were obtained as a custom track ([ 55, 56]; ).
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