Sentence examples for database of strain from inspiring English sources

The nucleotide sequence of PaXynT [accession No. DF196774 (GAC73192.1)], obtained from the genome database of strain T-34 using its N-terminal amino acid sequence, was 91% identical to that of PaXynG (accession No. AB901085), and the deduced amino acid sequence is 98% identical.

Putative PLD genes in the P. infestans genome database of strain T30-4 (http://www.broad.mit.edu/annotation/genome/phytophthora_infestans) were identified by several methods including automatic annotation, BLAST searches with the P. sojae and P. ramorum PLD gene models [4], and with representative PLD sequences from NCBI GenBank.

TSN is an electronic database of strain specific, qualitative and quantitative antimicrobial susceptibility test data reported by clinical laboratories in North America that has been used extensively in the past to evaluate various trends regarding antimicrobial susceptibility [ 3- 6].

The genomic sequences were compared against the database of strain 630 proteins by blastx, and a CDS feature in the query genome was created when a hit of over 90% identity was found.

A search of a database of HIV strains in Louisiana had turned up two pairs of infections that appeared to be more closely related than the patient's and Allen's, she said.

To identify all candidate SNPs for a particular QTL, the database of founder strains' genome sequences can compare responder against nonresponder haplotypes.

The genomic sequence encoding the VP1 capsid protein gives excellent results because of the high correlation between serotype and genetic information, and the availability of a complete database of reference strains isolated in the 1950's and 1960's [ 15].

However, the new scheme is favoured as it allows a much wider group of species to be studied, allowing strains to be assigned via the internet to all Mitis, Anginosus and Salivarius group species (and to some other non-viridans streptococci including S. agalactiae and S. pyogenes) using the initial database of 420 strains.

To address this need, we sought to build a database of mouse inbred strain SNPs predicted to cause functional changes in protein sequence, including missense, nonsense, and splice site mutations, that could be easily searched by strain, type, chromosomal location and functional consequence.

Analysis of the metabolism database of C. pseudotuberculosis strains Cp1002 and CpC231 revealed specific pathway differences between the two strains.

It provides a database of all characterized strains of a group of similar species (in this case, all of the 420 streptococcal strains characterized by MLSA), to which new strains can be added by the user community.