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In due course, the database generated with this tool might replace analytical homogenization models.
The simulations are performed with an interatomic potential which is obtained through matching of atomic forces to a database generated with density-functional calculations.
He also established many early molecular databases in China, including a protein informatics system (the multi-protein survey system, MPSS) (Hao et al., 2005), a database system for plant resistance candidate genes (PlantQTL-GE) (Zeng et al., 2007), and a mouse mutagenesis database, generated with PB transposon methods (PBmice) (Sun et al., 2008).
Genome sequences and the COG database generated with 43 organisms with sequences and alignments were sourced from NCBI [ 15].
Cis effects were checked in the eQTL database generated with the heterogeneous stock of the Welcome Trust Case Control Consortium http://gscan.well.ox.ac.uk/.ac.uk/
Single copy gene set from A. thaliana was obtained from the Compositae Genome Project Database [ 58] and used as query in a BLAST search against a database generated with the Citrus unigenes.
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Nowadays, wave reanalyses databases generated with third generation models provide useful wave climate information to complement, both in time and space, the instrumental measurements (buoys and alimetry observations).
This software front-end for interpolated climate databases, generated with the Parameter-elevation Regressions on Independent Slopes Model (PRISM) (Daly et al. 2008), allows to query 84 historical monthly, seasonal and annual climate variables for the years 1901-2009.
This in silico study uses publicly available microarray databases generated with Affymetrix GeneChip technology.
The false discovery rate (FDR) was calculated by simultaneously using the true and the reverse databases generated with Phenyx, as previously described.
The database generated was compared with several vertebrate ovary/unfertilized egg transcriptomes generated with the large-scale EST sequencing approach in order to identify functionally important maternal transcripts and proteins stored in germ cells.
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