Sentence examples for database from the top from inspiring English sources

The remaining candidate ORFs were then classified as intact or pseudogenes by generating a Blast database from the top HAMAP result for each candidate ORF, then two nucleotide query files were generated: one based on the PGAAP annotation and another including 2,500 nucleotides on either end of the candidate ORF.

BlastX searches against the database generated from the top HAMAP result were then performed on each query file, and the output was parsed to search for extended protein matches that indicated either truncated candidate ORFs or possible frameshifted candidate ORFs.

An in-house script was used to retrieve best matches from the outputs of BLASTn and tBLASTx text files, retaining the following information: gene identifier, description, BLAST score, percent identity, alignment length, reading frame, and database name from the top-scoring alignments.

This was done by running searches (against all of the ligands retrieved from the database) and analysing the top results for a number of diverse target-bound structures of different chemical natures, where the query structure and search space topologies were only obtained from the target-bound conformations in the PDB structure.

The application, however, comes preloaded with a database of TV shows drawn from the top network sites.

Function prediction by transfer of annotation from the top database hit in a homology search has been shown to be prone to systematic error.

Using the PubMed database, we retrieved 1,120 articles from the top ten internal medicine journals and 4,644 articles from the two main transplantation journals (Transplantation and American Journal of Transplantation).

Its maximum enrichment factor was 12.5 with the top 1% from the database and it retrieved c. 90% of active compounds from the top 50% in the database (Figure 4 a-2)).

On the database side, they're being squeezed from the top by IBM with the DB2 product and, from the bottom by Microsoft with the SQL Server line of products.

The first dataset was the worst case in our experiments and Figure 4 b-1) and Figure 4 b-2) show that the maximum enrichment factor was 4.2 with the top 1% from the database (Figure 4 b-1)) while 47% of the active compounds were retrieved from the top 50% in the database (Figure 4 b-2)).

In addition, BLASTX to a non-redundant (nr) protein database from the NCBI GenBank database [ 91, 92] was used to assign the top homologous hits to the assembled contigs.