Sentence examples for database depositions from inspiring English sources

We will therefore use for instance EGII instead of Cel5A, based on the consideration that these names were mainly used in database depositions and give a clearer indication of function.

The sequence of the oligonucleotide used to degrade endogenous eya1 mRNA was A+T+T+T+C C A T A G A C C+T+A+G+A with the sequence complementary to the 17 nucleotides surrounding the AUG (the complement of AUG is the boldface CAT of the oligonucleotide) of the eya1 mRNA of the GenBank® Nucleotide Sequence Database depositions (AF352029.1 and AF352028.1 for Xenopus eya1).

Science began making explicit statements regarding database deposition in an August 5 , 1988editorial in which Daniel E. Koshland, Jr. (1988) wrote that Science and other journals had developed procedures to help ensure that data would be sent to appropriate repositories [17].

Finally, Skyline allows the export of processed data in custom report formats compatible with subsequent statistical analyses, publication, and database deposition.

The Human Proteome Organisation — Proteomics Standards Initiative (HUPO-PSI) has been working for ten years on the development of standardised formats that facilitate data sharing and public database deposition.

The mentioned data formats are designed for representing proteomics data to support data sharing, re-analysis, database deposition and long-term storage of these data in public repositories like PRIDE (Protein IDEntifications database) (2) or PeptideAtlas (7).

Its aim is to promote European collaboration toward unified mouse databases and deposition of existing Cre mouse strains into EMMA and to share and publicize information on mouse characteristics and availability.

To increase transparency, at least two databases for deposition of antibody quality data from researchers were put in place (http://compbio.med.harvard.edu/antibodies/; http://www.histoneantibodies.com/) (Egelhofer et al., 2011; Rothbart et al., 2015).

One possible estimation method would be to combine the use of the deposition database with an appropriate dispersal model.

This study considers 47,123 small molecules with experimental 3-D coordinates available from the Molecular Modeling Database (MMDB) [31] deposition in PubChem (Additional file 1).

pE-DB (http://pedb.vib.be/) is the first database for the deposition of structural ensembles (see section 4.2) of intrinsically disordered proteins.