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Potential overlap of the false positives data set with the true positives data set was avoided by filtering the false positives data set against the true positives data set and the chip-chip fragment database contained in the Transfac Professional Rel.
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The database contains in- and outpatient diagnoses, diagnostic and therapeutic procedures, and outpatient drug prescriptions.
The second database contained in addition sequences from host-related bivalves and symbiont-related bacteria (Supplementary file 1H).
The abstraction of the database is contained in the QCAnalysis module, which is used to add an analysis to the database.
More information on the FAO Capital Stock database is contained in the related Metadata and Data Dictionary files.
In terms of building and initiating queries within custom applications, the Java API mirrors the Perl API whereby the abstraction of the database is contained in the QCAnalysis class.
Moreover, according to the description of TRANSFAC database, TFs contained in the dataset 2 had less conserved binding sites, since their TFBSs were not able to be aligned to generate a PWM.
The species and database origin was contained in the sequence identifier.
We restricted our use of the database to records contained in the National Human Activity Pattern Survey (NHAPS) portion of the CHAD and to records of individuals > 20 years of age.
These 10 major strains of bacteria cover 7120 PPIs in the PATRIC database, constituting 99% of the total PPIs contained in the database (data downloaded on April 3 , 2012.
The evaluation of the scope and accuracy of the references' drug information was limited to a comparison of the monographs contained in each database to the information contained in the package insert for a single drug, fluconazole.
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