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A direct query was submitted to a database using standard open database connectivity connection.
This process requires an open database connectivity (ODBC) connection that may already exists or can be created from within the reverse engineering wizard.
The RIF takes advantage of open database connectivity to connect to an external database where geocoded health and population data are stored.
The Tracker was built by a NYCRIS and NCIN-employed database manager; the database tier was built using MS SQL Server, the front-end application tier was created using MS Access and the two tiers connect using open database connectivity (ODBC).
MySQL proprietary Java Database Connectivity (JDBC) driver was used for client connection.
Connection to the database is established via Java Database Connectivity (JDBC) and by specifying the database location and the JDBC driver, for example: This prompts for a password for the given username.
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SMMD: Small molecule mechanism database; CMap: Connectivity map; GEO: Gene expression omnibus; SM: Small molecule; AP: Active pathway; DP: Database pathway.
Future versions of PathwayOracle will have support for querying such databases for connectivity components and, ultimately, for automated connectivity construction based on a set of signaling nodes specified by the user.
To evaluate the results, we compared 2688 extracted connections with the Brain Architecture Management System (an existing database of rat connectivity).
This database drastically accelerates connectivity literature review, by providing a centralized repository of connectivity data to neuroscientists.
Its researchers recently published a paper in Science about creating a new kind of database, dubbed the "connectivity map".
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