Rice QTLs, their corresponding rice gene loci and metadata, were collected from various biological databases such as Gramene Database (6) release #30 (http://www.gramene.org/, Rice Annotation Project (2) release #6 (http://rice.plantbiology.msu.edu/), GO Database (http://amigo.geneontology.org/cgi-bin/amigo/go.cgi), GenBank at NCBI and KEGG Database (http://www.genome.jp/tools/kaas).jp/tools/kaas
All original recordings showed high signal-to-noise ratios as they had been collected from various synthesis databases.
The nucleotide sequences and corresponding amino acid sequences for the representative taxa were collected from various public databases, including GenBank, PlantGDB and PlantTribes [ 36- 38].
Data pertaining to the different components of R. palmatum were collected from various different databases, including PubMed for the U.S. National Library of Medicine and the National Institute of Health, SciFinder Scholar for the American Chemical Society, and the Chinese National Knowledge Infrastructure of Tsinghua University.
For GSEA analysis (http://www.broad.mit.edu/gsea/index.jsp), we used the molecular signature database C2, which contains 1892 curated gene sets that are collected from various sources including online pathway databases and knowledge of domain experts.
This portal decreases the manual curation of an array of datasets collected from various rice genomics databases as well as those generated in-house.
Gene families consist of sequences that are collected from various sources, including existing databases and direct sequencing.
All yeast protein protein interaction data were collected from Li et al., where protein protein interaction pairs were collected from various high throughput experiments and databases.
Here, we present the LANDslides and Floods National Database (LAND-deFeND), a new database structure able to store, organize, and manage in a single digital structure spatial information collected from various sources with different accuracy.
The data were collected from various resources including MEDLINE abstracts, full papers, UniProt, databases www.neuropeptides.nl (1) and NeuroPedia (20).
