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As shown in Table 3, the memory required for GHOSTZ increases nearly linearly in proportion to the size of the database chunks.
Therefore, using smaller database chunks, GHOSTZ is executable even on a typical PC. > -wrap-foot> > -wrap-foot> In the evaluation experiment, GHOSTZ achieved an ∼2-fold increase in speed, relative to GHOSTZ without clustering.
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Homology search computation times increase as the size of a database chunk decreases.
However, GHOSTZ can reduce the memory required by decreasing the database chunk size.
Of course, a trade-off exists between database chunk size and search speed.
GHOSTZ sequentially searches each database chunk, and merges its results with the results of previous chunk searches, when this chunk division is performed before the construction of its database indexes.
He started writing a script, chopping it up, storing snippets in a database, tagging chunks with specific keywords – a process he'd already practised using transcripts from genuine police interrogations.
Therefore, GHOSTZ divides a database into several chunks.
From now on, by input sequence we mean either a database sequence or a chunk produced by such splitting, which enables us to avoid cluttering the algorithm description with the details of handling long sequences.
Months after the Sept. 11, 2001, attacks, Swift began turning over large chunks of its database in response to a series of unusually broad subpoenas from the Treasury Department.
Recently, however, a small group of dedicated open-government activists teamed up to push the court records system into the 21st century — by simply grabbing enormous chunks of the database and giving the documents away, to the great annoyance of the government.
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