The results of this study show that the data overlap of networks reconstructed with different databases, especially at the reaction level, was surprisingly low and therefore, the level of database agreement is deemed to be low as well.
After we have obtained the pathway-gene and pathway-gene pair relationships from different pathway databases, agreement among the databases can be analyzed.
Gene regulations identified by the program are classified as certain, possible and uncertain depending on the number of supporting evidences (agreement with the databases, agreement with GO annotations, R2 score < 3 for activation and R2 score > 6 for inhibition): 1.
In the dataset of 90 yeast genes, it inferred 470 gene regulations, and 241 out of the 470 regulations have at least two supporting evidences such as agreement with the known data of databases, agreement with GO annotations, R2 score < 3 for activation, and R2 score > 6 for inhibition (Additional file 3).
Aggregate data from the Labor Force Survey, Wage Structure Survey, Ministry of Labor database on Agreements and Union Representatives, and the Bénéfices Industriels et Commerciaux/Bénéfices Réels Normaux (enterprise‐level business data) were integrated via the Nomenclature d'Activités et de Produits 100.
While comparing the calculated hypnogram with the prescored hypnogram from Physionet database, an agreement of 41.3% could be reached.
External validation of the retrieved models was performed using the PreVILIG database after agreement by all the PreVILIG collaborators.
Matching of individuals between the ONS and NAC databases required agreement of name, date of birth and unique NHS number.
The linkage was evaluated by looking at linkage rate, characteristics of linked and non-linked cases, first trimester exposure rates for six groups of medicines according to the prescription data and information on medication use registered in the CA databases, and agreement of exposure.
According to the IAW collective agreements database about half of all firms under collective agreements have recourse to opening clauses, though far fewer use them (Heinbach 2005).
