Sentence examples for data were searched by from inspiring English sources

Microarray resequencing data and conventional sequencing data were searched by using the Influenza Sequence Database with the BLAST algorithm.

All MS/MS data were searched by SV Finder software (Ver 1.2, ProtTech Inc ., to look for potential sequence modification.

Peak data were searched by Mascot (v.2.2) search engine (Matrix Science, Boston, MA, USA) using the IPI and swissprot database restricted to human taxonomy.

Data were searched by SEQUEST through Bioworks 3.3.1 interface (Thermo-Finnigan) against the CDS of MmmSC PG1 and the CDS of Mmc 95010.

The data were searched by GPS Explorer (Version 3.6) with the search engine MASCOT (Version 2.3, Matrix Science Inc ,Boston, MA).

Data were searched by using a mass tolerance value of 2 Da for precursor ion and 0.8 Da for MS/MS fragments, trypsin as proteolytic enzyme, a missed cleavages maximum value of 2 and Cys carbamidomethylation and Met oxidation as fixed and variable modification, respectively.

After data dependent acquisition, tandem MS data was searched by SEQUEST (v27) against the International Protein Index human protein database (v3.68) and protein identifications were filtered using PeptideProphet.

Orbitrap data was searched by Mascot 2.2 (Matrix Science Limited, London, UK) under the software platform Proteome Discoverer 1.1 (Thermo) against the human Uniref100 protein sequence database.

All Orbitrap data was searched by Mascot 2.2 (Matrix Science Limited, London, UK) under the software platform Proteome Discoverer 1.1 (Thermo) against the human swissprot database (build 57.13) and results were limited to a false discovery rate of <1%.

Data were searched and extracted independently by two authors (RH and JM), the results were compared and consensus obtained through discussion.

The acquired data were searched against the NCBI nr database by MASCOT software (Matrix Science, Boston, MA, USA).