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The optical mapping data were assembled by MapSolver (v0.5).
The obtained EST data were assembled by the CAP3 program to obtain non-redundant sequences.
Data were assembled by using GenomeStudio Methylation software from Illumina Sann Diego, CA, USA).
Sequence data were assembled by using Sequencher software (Gene Codes Corp., Ann Arbor, MI, USA).
High-quality data were assembled by Newbler2.6 and the gaps were then complemented by PCR amplification.
Raw sequence data were assembled by using Contig Express (Vector NTI suite 9.1; Invitrogen, Carlsbad, CA, USA), and a 351-nt fragment of the nucleoprotein coding sequence was obtained after deletion of primer sequences.
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The new data was assembled by the United Nations Office for Drug Control and Crime Prevention in Vienna.
Final project datasets of combined web, paper and biomechanical data are assembled by transferring data from Microsoft SQL Server to SAS System for Windows (Release 9.3, SAS Institute Inc., Cary, NC, USA).
The sequencing data was assembled by SeqMan Pro (version 7.1, DNAstar Lasergene), and the mutations that were uncovered were identified by comparison with the H37Rv sequences (NC_000962.3) of embB, embA, embC, embR, and ubiA from the GenBank database (http://www.ncbi.nlm.nih.gov/nuccore/NC_000962.3) using the MegAlign (version 7.1, DNAstar Lasergene).
A dataset of control animal microarray expression data was assembled by a working group of the Health and Environmental Sciences Institute's Technical Committee on the Application of Genomics in Mechanism Based Risk Assessment in order to provide a public resource for assessments of variability in baseline gene expression.
All raw data were assembled and analyzed by two individuals independently and blinded to the analyses performed by the other.
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