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Maximum likelihood phylogeny of the concatenated data was inferred with RAxML MPI version 2.2.3 [36].
An evolutionary model for the data was inferred using the Modeltest program[20] and the model was implemented in PAUP4.0 (http://paup.csit.fsu.edu/) to estimate branch lengths of the trees obtained as described above.
The best fitting evolutionary model for the protein data was inferred with Prottest v1.4 [ 90].
The demographic history contained in the mtDNA CR-I sequence data was inferred using two approaches.
The most likely value of K, given the data, was inferred by the Evanno et al.
For each data set, the total number of synonymous mutations implied by the data was inferred using Yang's [ 27] methodology, under the appropriate model (see below).
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Pan-African concentration data were inferred from a meta-analysis of literature data.
The GPS-TEC data were inferred from the dual-frequency GPS receivers given in Figure 1.
In this paper, the data are inferred using an ANN algorithm to establish a forward/reverse correspondence between the longitude, latitude, elevation and solar irradiation.
We assign the lowest data quality level to those magnitudes and volumes that are 'assumed.' These are cases where quantitative data are inferred from qualitative descriptions.
Taking a dig at YouTube where a lot of demographic data is inferred indirectly and not always accurately, Facebook writes "In narrowly targeted campaigns, the average online reach is 38% accurate, but on Facebook, our average reach is 89% accurate".
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com