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The similarity (distance) between gene expression data was defined using Pearson correlation (uncentered).
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PSIs in the data were defined using the ICD-10 codes in the 49 secondary diagnosis coding fields.
In [ 20], haplotypes based on HD marker data are defined using Beagle [ 21], however fixedly defined as the first locus out of ten consecutive loci in genomic evaluation.
Firstly, for 6 of the serologic data sets, infection was defined using a relatively low hemagglutination-inhibiting antibody titer (≥1 10 or lower).
Briefly, incident AMI was defined using enzyme data, EKG charts, clinical data, 410 in-patient ICD-9 codes (Medicare), and/or death certificates.
Glycaemic control was defined using data of FBS, PPBS and HbA1c at the latest follow-up visits.
Menopausal status was defined using data from the study questionnaire, which was collected during the case control interview (Shantakumar et al. 2007).
Fetal smoke exposure was defined using data of maternal smoking habits during first, second and third trimester of pregnancy collected by questionnaires.
a"Worsened" was defined, using data from baseline and Week 24, as those patients with at least a Grade 1 change in anemia based on hemoglobin levels.
b"Improved" was defined, using data from EOT and EOT + 24 weeks (EOS, 72 weeks), as at least a Grade 1 improvement in anemia based on hemoglobin levels.
A cgMLST scheme of K. pneumoniae was defined using NCBI data in this study.
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