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Haplotypes were reconstructed using the Bayesian haplotype reconstruction method for single nucleotide polymorphisms (SNP) from population genotype data utilizing the program PHASE v.2.1.1 [ 28].
Association rate constants (kon) were obtained by non-linear least-square fitting of a reversible bimolecular reaction model (A+ B↔ C) to the data utilizing the program package BPCfit (Witte et al, 2008).
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The structural models were validated utilizing the program Procheck [ 69].
We then utilized the program STRUCTURE 2.2 on the multilocus AFLP data to assess hybrid origin and perform assignment tests for the putative hybrids [ 66, 67].
All the undergraduate colleges utilize the program.
Instead of hardcopy data collection, we utilized the free program called EpiData to directly enter women's responses to the screening questionnaire on a computer [ 15].
In order to reduce computing and data transfer load for search queries and analyses, we developed special methods for data-intensive computing utilizing the MapReduce [38] programming paradigm for distributed, data-locality aware computations.
Using field data and samples from 2007, the sensitivity and specificity of the PS clinical case definition utilized in the program was estimated as 89 and 95%, respectively.
The Hansen et al. (2010) procedure allows users outside the United States to utilize the Hazus program by first distributing U.S. proxy data and provides instructions on replacing these proxy data with country-specific information.
The TASO data we utilize is generated through the program's management information system (a paper system of charts and records) and then transferred to a set of electronic databases.
We also utilized the *BEAST program to analyze the combined data of cp- and nrDNA sequences.
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