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It is believed that the extracted results using nonlinear curve fitting method is more accurate due to the utilization of actual data and the minimization of data transformation steps required in the linear curve fitting [42, 43]. Figure 7 shows the J-E results for the samples annealed in O2, Ar, and FG ambient, which fitted well with FN tunneling model.
The data transformation steps behind the visual analysis process are illustrated in Fig. 1.
In GeneSpring, normalization and data transformation steps for one-colour data were applied as recommended by Agilent Technologies.
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As the first data transformation step for a given double-mutant fitness matrix W (Figure 5), we investigated whether some simple data preprocessing option, such as removing potential location shifts in W before performing its approximation, was able to improve the discrimination power of the data matrix.
Therefore, the performance of the predictive algorithm was not affected by this data transformation step.
We retained 75 principal components of PCA in the preliminary data transformation step, which altogether contained more that 85% of the total genetic variation.
For accurate molecular subtyping, we present an alternative approach to gene centering that incorporates a routine data transformation step prior to subtyping.
To avoid over-fitting, we retained only the 111 first principle components (PCs) from the preliminary data transformation step (indicated to be the optimal number based on the optim.a.score function), representing 46% of the total variation in the data set (analysis including all PCs yielded virtually identical results).
Regarding the data transformation and analysis step, there is potential for probabilistic text mining methods.
The image processing part further subsumes several data transformation and data cleaning steps while the data is still in its image representation.
The synthesis statements remain consistent with the review authors' work but also build in the results of the data transformation performed in earlier steps.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com