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Alignment of the Illumina sequence data to the draft Atlantic salmon reference genome assembly (NCBI Assembly GCA_000233375.1) identified 472,072 (RR-Seq), 467,268 (RAD-Seq) and 816,570 (RNA-Seq) putative variable SNP positions.
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AR performed the statistical analysis and interpreted the data to draft the manuscript.
AB contributed to the interpretation of the data and to the drafting the manuscript.
LBC has contributed to the analysis and interpretation of data and to the drafting the manuscript.
JMTM contributed to the acquisition of data and to the drafting and revision of the manuscript.
LBC contributed to the analysis and interpretation of data and to the drafting of the manuscript.
All authors contributed to the interpretation of these data and to the drafting of the manuscript.
AE analyzed the data and contributed to the drafting of the data.
MLD helped to conceive the study, to interpret the data, and to draft the manuscript.
All authors participated in the design of the study, helped to interpret the data and to draft the manuscript.
LM contributed to variable design, performed the data analysis contributed to the drafting of the manuscript.
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