This study was preregistered, and the plans, data scripts, and data are publicly available (https://osf.io/gkt84/).
3D file data, scripts, and the Jmol 3D Print website are provided openly to the community in an effort to promote discovery and use of 3D printable crystal structures.
Perl [87] was used to extract, examine and manipulate data; scripts are available upon request.
Files containing the input data, scripts, and output models are available at http://salilab.org/mediator.
All data, scripts, and results from this study have been deposited in the Dryad Digital Repository: 10.5061/dryad.m0p56 (Lotterhos 2013).
For efficient assembly, analysis and annotation of the data, scripts developed in-house and described earlier were used [ 56].
Further details on CRI implementation, including raw data, processed data, scripts (python and R) and output files can be accessed at [ 29].
This Data Note provides detailed description of the data, intermediately processed data, scripts and experimental validations that have not been reported before and are currently available at GigaDB.
The framework separates project-specific files from reference data, scripts and software suites that are reusable in other projects (Fig. 1a).
Data, scripts and maps should be organized and written with the intention to share and allow reuse, and they should have licenses allowing redistribution.
