In general, the scripts for the examples execute DASMiner API calls to collect the data, parse the data locally to construct an appropriate data representation, and then plot a graphical visualization.
In recent years, the HUPO Proteomics Standards Initiative (PSI) has developed a set of important community XML file formats such as mzML (for MS data) [59], mzIdentML (for peptide/protein identifications) [61], and gelML (for gel data) [80], for proteomics data storing, representation and visualization.
The main advantage of these solutions is to offer powerful visualization with numerous types of graph for data representation and allow high interactivity with these data for changing parameters or zooming.
Typically, the utilization of human cognition in exploratory data analysis relies on proper representation and visualization of the data in a low-dimensional embedding space [3 8].
A more realistic solution will lie in the development of generic tools that enable the flexible construction of such Wikis by embedding generic modules for ontology management, XML data representation, visualization, database query, and data analysis.
Computational tools have become critical for the integration, representation and visualization of heterogeneous genomics, proteomics and biomedical data [49].
This approach has been implemented as a decision support system through integration of data management, mathematical modeling, uncertainty and sensitivity analysis, scenario analysis, and result representation and visualization.
Develops an understanding of key digital humanities concepts such as data representation, digital archives, information visualization, and user interaction through the study of contemporary research in conjunction with working on real-world projects for scholarly, educational, and public needs.
Visual analytics fluency allows the ability (1) to transform information from one representation to another; (2) to comprehend the equivalence in different modes of representations, including data and visualizations; and (3) to comprehend information presented in different representations.
