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Data of sequences were analyzed by the software Genetool lite version 1.0.
Recent research using genome-scale data of sequences, mutants, and PPIs has revealed that several genomic parameters such as expression breadth, expression abundance, PPI, and essentiality exhibit statistically significant correlations with evolutionary rates [ 9- 12].
Recently, several research groups have investigated this issue using genome-scale data of sequences, mutants, and PPIs, and have concluded that some genomic parameters exhibit weak but statistically significant correlations with evolutionary rates [ 9- 12].
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Graphical data of sequencing results were analyzed by Chromas Version 1.4.5.
The original data of sequencing short reads, the assembled sequence and the SNP data of each accession can be downloaded.
In total, we generated 4.16 Gb of data of sequencing reads ranging from 40 to 1196 bp.
The data of sequence preferences for nucleosomes were taken from Segal et al. [ 15], which were normalized, such that their values are between 0 and 1.
Independent test data consisted of sequences and binding data for peptides of length ≤25.
Training data consisted of sequences and binding data for nonamer (nine amino acid) peptides.
New technologies support the generation of genome-scale data sets of sequences, sequence variants, transcripts, and proteins; genetic elements underpinning understanding of biomedicine and disease.
The 16S PacBio data consists of sequences of 800 900 bp in length.
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