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Expression data for candidates were analyzed as the difference in critical threshold between the genes of interest and EF1a (Δ Ct) using sas software (SAS Institute 2004).
Univariate and multivariate Cox regression of DMFS on Z-transformed gene expression was performed on the discovery data for candidates with known official gene symbol annotation identified from both approaches, and probes with consistent correlation with DMFS in both univariate and multivariate settings were chosen for further assessment in the remaining 64 HRneg training cases from [GEO GSE7930].
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> -wrap-foot> We then examined the eQTL data for candidate genes underlying EAE phenotypes.
To filter data for candidate transcript validation, a p-value cutoff (p ≤ 0.001) was employed according to the Audic and Claverie test statistic[ 40].
This paper proposes a simple preprocessing technique aiming at solving the inter- and intra-sample variability in raw MALDI-TOF MS data for candidate marker ion identification.
An increasingly wide variety of experimental animal models are available to investigate secondary injury processes in TBI and to provide preclinical data for candidate therapeutic approaches.
We initially screened the microarray data for candidate genes whose expression was repressed following KA-induced seizures and examined whether these genes contained functional NRSEs.
Our results provide an overview of gene expression profiles of contrasting L. sativus genotypes inoculated with rust, offering a valuable set of sequence data for candidate rust resistant gene discovery.
An approach similar to that of genome-wide association studies (GWAS) called environment-wide association study (EWAS) has recently been proposed to screen both genetic and environmental data for candidate interacting factors [ 13- 15].
After using pure parental frequency to estimate the location of Eos/ Ste mutations in the genome, we then filtered the sequence data for candidate mutations within the region of interest (see Materials and Methods).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com