Sentence examples for data for assembly from inspiring English sources

The Pregap4 modules were used to prepare the sequence data for assembly (quality analysis).

Collectively, these data for assembly of metabolosome signature enzymes suggest that inter-protein interactions are not only essential for formation of the holoenzyme but likewise provide a means to pack multiple proteins in the core of the metabolosome.

We merged all the sequences from three libraries (another transgenic library was added for assembly) to use as the input data for assembly to obtain a better assembly result.

Although those seeds provided a clean and complete assembly, the inability of all contigs to join highlighted the reality that there were practical limits to the contig extension that PRICE could accomplish, and the presence of regions with insufficient data for assembly can generate inaccessible genomic islands that would be missed by seeds distributed too sparsely.

Furthermore, the extraction, dilution and necessary mixing are likely to shear the DNA leading to short scaffolds, which requires more data for assembly and results in a greater difficulty in phasing across repeats or extended regions of homozygosity where there are no informative SNP for joining scaffolds.

BGD currently provides data for assemblies Btau_3.1 and Btau_4.0 [ 2], which were generated by the Baylor College of Medicine Human Genome Sequencing Center (BCM-HGSC), although alternative assemblies are available elsewhere [ 3].

Our primary aim is to develop general techniques that can be used for processing any short read data (though in particular data intended for assembly rather than peak analysis), and each experiment will have its own characteristics; that is, we propose a first stage of analysis that should be applied before any further processing is undertaken.

Furthermore, 92.4% and 89.8% of the markers had less than 5% of missing data for W7984 assembly and Chinese Spring assembly, respectively.

Short read archive (SRA) accessions for all data are found in Table  1.> -wrap-foot> aData from Hull et al. 2014 [ 3] Data used for assembly corresponded to the ~145 million bp of sequence reads generated previously [ 3], and 293 million bp of new data from 11 Illumina runs covering five tissue-specific libraries.

We employed random sampling to reduce the number of input reads [ 20] and attempted to find the best amount of input data size for assembly [ 9].

This is likely due to the presence of high allelic variation in the data used for assembly arising from the pooled nature of the samples (pooled RNA from seedlings) used for sequencing.