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Data analysis overview: The resulting memory data compendium was then analyzed for short- and long-term memory in each output signal individually and in all possible combinations of the three signals by applying the memory quantification algorithm described in detail in Materials and Methods and illustrated in the flow chart in Supplementary Information Section S2.
Thus, with 30 cultures three for each of the 10 cell histories– and three observables per culture measured every 15 minutes for 24 hours in the common stress medium starting at t0, the memory data compendium for this set of experiments consists of 30×3×96 = 8,640 measurements arranged in a 90 by 96 matrix.
Each network reweights the genomic data compendium to yield predictions tailored to an individual biological context of interest.
The analysis of gene expression data compendium provided information on the nucleoid organisation in circular double stranded DNA bacteria.
The S. cerevisiae microarray data compendium [ 10] contains expression profiles for 6153 genes in 173 different stress conditions.
The new findings are presented in two publications: Narrowing the Gaps to Meet the Goals and Progress for Children: Achieving the MDGs with Equity, UNICEF's signature data compendium.
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Our findings were reproduced using two independent data compendiums, suggesting that these observations reflect true biological relationships.
A large multi data set compendium consisting of 165 diverse data sets (see Additional file 3: Table S3) was used to generate an accurate representation of gene expression.
Table 2: (see Additional File) shows the list of drugs which have either been licensed for premenstrual symptoms or which appear in the data sheet compendium, MIMS or the BNF as indicated for premenstrual symptoms.
The compendium data were generated through pooling the raw data of 172 microarray data and then normalized with RMA algorithm [ 29].
For the "compendium" data set of nine separate breast tumor expression profiling data sets for survival analysis, gene transcription profiling data sets (all on Affymetrix U133 array, A set, and all with DMFS as an outcome measure) were previously obtained from previous studies and consolidated into one data set.
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