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Firstly, when using a motion tracking system, there is no mismatch between emission and transmission scans, as emission data are realigned to the position of the head during the transmission scan.
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Data were realigned to correct for head movements.
Data were realigned to termination of phase-locking events (i.e. phase-locking cessation).
The EPI data were realigned to the first image and resliced using a six-parameter rigid body transformation and sinc interpolation in space.
Briefly, fMRI data were realigned to minimize motion-related artifacts and smoothed using a Gaussian filter (full-width at half maximum 8.82 mm) (31).
The data were realigned to the sixth volume, normalized to the Montreal Neurological Institute template (resampling to a voxel size of 2 × 2 × 2 mm), and smoothed with an 8-mm full-width-at-half-maximum Gaussian filter.
NAC frames x+1... N are realigned to the sum of the first x NAC frames.
Structural-diffusion data alignment: The high-resolution 3DT1w volume was realigned to the diffusion data by inverting the full-affine transformation (12 degrees of freedom, FLIRT, FSL) (Jenkinson et al. 2002 ) from diffusion to high-resolution space.
The fMRI data were realigned, spatially normalized to the standard brain space, and smoothed with an isotropic Gaussian kernel of 8 mm full width at half maximum (FWHM).
After automatic skin surface segmentation based on the back-scattering intensity image, the phase retardation data were realigned with respect to the surface.
In the first preprocessing step, data were checked for obvious artefacts, and all images were realigned to the first image.
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