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After that, the best architecture in terms of the least error and cycle of calculation is selected.
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Every one cycle of calculations progresses fluid flow one time step in time.
Convergence of the self-consistent cycle of calculations was determined by the difference in full energies obtained in two successive stages which was chosen less than 10−6 eV.
Using any one of them as the basis for one cycle of calculations would lead to a low energy structure.
To locate another low energy structure, we perform another cycle of calculations, again selecting m2 points in the conformational space using a different set of MOLS.
The best architecture, according to the term of calculation cycles and considering the correlating behavior and output cycles of calculation was 19-8-1 19-8-1 19-8-1
The 20 lowest-energy structures obtained after seven cycles of calculations in Cyana were further refined using standard protocols in Xplor-NIH [ 23] to yield 15 lowest-energy structures comprising the final ensemble.
The algorithm of consecutive (cycle-by-cycle) calculation of beam mode shapes amplitudes is presented.
Thus one cycle of MOLS calculations leads to one low energy conformation.
For every torsion (for flexible bonds) of curcumin, all over 150 cycles of docking calculations were done by Vina at every cluster of pocket (binding site 1 5).
The BEAVRS benchmark was selected as an example and RMC was applied to a full core, two cycle burnup calculation of BEAVRS.
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