Exact(1)
Trial Registration: The original trial (van der Heijde et al., Arthritis Rheum 2005) that is the basis for this secondary report had FPI 06-Jan-2000 and LPO 24-Sep-2001, which predate the cutoff requirement for trial registration.
Similar(59)
First, we investigate how data quality is affected by excluding samples that do not meet quality control cutoff requirements.
The online 454 Replicate Filter (http://microbiomes.umms.med.umich.edu/replicates/) was used to filter out exact replicate reads (cutoff 0.99, length requirement 1.0 and initial base pair match 3).
NRS outcome cutoffs were selected based on accepted definitions of "moderate-to-severe" and "mild" postoperative pain [ 8], and the IV morphine requirement cutoff chosen as 1 SD (standard deviation) from mean postoperative morphine requirements in hip arthroscopy as established by Morgenthaler [ 9].
The information about worm paralogs is obtained from the EuGenes database [ 18] and consists of 30036 paralogous pairs involving 10071 worm proteins (blastp with 10-30 cutoff and no requirements on the length of aligned region).
Parameters were set at 0.95 sequence identity cutoff, 0 length difference requirement, and 3 beginning base pairs to check.
For data sets with <350 Mb of shotgun reads, the online 454 Replicate Filter (http://microbiomes.msu.edu/replicates/ [date last accessed 17 Nov 2011]) was used to filter out exact replicates (cutoff = 1.0, length requirement = 1.00, and initial base pair match = 3).
For the purposes of describing the prevalence of deficiency, we used the computed Estimated Average Requirement (EAR) cutoff for estimated 24-h urinary iodine excretion (160 μg/d, assuming 90% excretion of the EAR of 180 μg/d), as in our previous study in UK pregnant women (8).
We tested, for example, different E-value cutoffs, different length requirements on the match region or when using methods of homology estimation that are completely independent of particular E-value thresholds (Additional file 1).
Therefore, this paper presents a verification methodology that reduces a given grid system model to a model to which it is possible to apply a "cutoff" theorem (i.e., a requirement is satisfied by a system with an arbitrary number of jobs if and only if it is satisfied by a system with a finite number of jobs up to a cutoff size).
Data from samples analyzed by Mascot were compared with ProteomeDiscoverer software (Thermo Scientific) utilizing a cutoff score of 40 and a requirement of two peptides per protein.
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