At cut-offs set for optimal specificity of 90% or more, the sensitivity of each gene in PT was over 70%.
Unless otherwise stated, we always remove overlap between training and test sets using CD-HIT with default cut-off set for sequence similarity (Fu et al., 2012).
GFP (out background cut-off set for non-fluorescent 293TETOFF cells) under conditions of Dox-mediated repression of the GFP transgene.
Contig6466 encodes a putative TRANSPARENT TESTA GLABRA1 (TTG) gene and its up-regulation was statistically significant (probability = 0.03), but fell below the 2 fold cut-off set for identification of differentially expressed genes.
Samples were judged to be positive if they fulfilled two criteria i.e. they showed a dose response to the antigen titration series and the measured autoantibody signal to one or more of the antigens was above the accepted cut-off set for that antigen assay.
About 25 mg of tissue was then cut off and set aside for RNA extraction.
To be considered as a reliable recombination event, the highest multiple-comparison-corrected P-value cut off was set at 10−5 for at least three different methods.
The cut off titre set for Salmonella typhi anti O was >1 80 while it was >1 160 for anti H in this study [ 11].
Knowledge scores ranged from 0-13 and cut off level of <9 were set for poor knowledge and ≥9 for good knowledge.
The cut off for positivity was set at 25 AU/mL.
The cut off point for statistical significance was set at the 5% level.
