Compound repeats can be sought by user's customized repeat combination.
TALENs consist of two functional domains: a customized repeat array of TAL DNA-binding domains that recognize a specific DNA sequence and nuclease domain of FokI, a class IIS restriction enzyme (Miller et al., 2011).
To examine repetitive sequences in both the HSY and the corresponding X, the sequences were masked by RepeatMasker using a customized repeat database as a library consisting of Repbase, TIGR repeat data, and papaya repeats [ 20].
As guests filed into the back yard of the sprawling estate, copious amounts of Jay's endorsed cognac, D'Ussé, were passed around, and numerous stations packed with delectable dishes such as truffle mac and cheese, white cheddar grits and customized omelets got repeat visits.
To construct a repeat library customized for this genome, we ran RepeatModeler with default parameters (http://www.repeatmasker.org/RepeatModeler.html), which detected 501 types of repeat elements that are ≥15-nt long and present as >15 copies in the C. milii genome.
CCT includes functionality that allows maps to be customized without the need to repeat the computationally intensive analysis steps used to assign COG categories and identify sequence similarities.
As previously described, the MAKER automated annotation pipeline was customized for both gene prediction and repeat identification in the ten P. taeda BAC assemblies.
But it did lead him to reminisce about the years when he dined on long tasting menus at the former Bouley in TriBeCa, which were customized so that no course was ever repeated.
The ∼2000 nt long sequences were sorted after repeat distribution patterns, for their visualization customized Genbank formatted feature files were generated and imported into Vector NTI (Invitrogen).
The searches may further be customized based on various microsatellite characteristics like motif type (mono, di, tri, tetra, penta, hexa), repeat motif and repeat kind (simple and composite).
Furthermore, to our knowledge, no studies have specifically selected patients primarily based on repeated non-response to treatment and attempted systematic, customized psychotherapeutic intervention with this group.
