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Modeling work was done using the COBRA toolbox for Matlab [ 62, 63] along with custom methods and the Gurobi Optimizer.
The use of custom methods for creating initial target sets were important, sometimes based on experiments under the investigator's control, rather than existing annotations from public databases.
Here, we present additional preprocessing methods to address the difference between probe types and compare our custom methods with existing methods in the literature.
Total RNA was then sent to the Center for Genomics and Bioinformatics at Indiana University, Bloomington (IU CGB), which prepared a normalized transcriptome (cDNA) library optimized for Roche 454 GS-FLX Titanium sequencing using custom methods (K. Mockaitis, unpublished, available upon request).
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We therefore decided to apply a custom method (described below and detailed in Methods section) on the temporal profiles from the original studies [ 3, 6].
However, Synkio's human-to-human custom method means it's more possible to get creative results.
Tumblr until recently was one of the few companies cited on TwoFactorAuth.org, a website that lists which services support two-factor (abbreviated 2FA), and which methods they offer – like SMS, Google Auth, Authy, or another custom method.
A custom method to generate fatigue crack growth (FCG) data requires testing of multiple specimens at different load ratios, R, and the application of a load shedding procedure from pre-cracking level to threshold.
The excito chamber method is a modified custom method to observe the mosquito behaviour change in the form (Fig. 3) of moving away from the treated to untreated fabric.
The user can also provide a custom method to be applied to each subsample.
We also compared our candidate genes with the genes selected by the Illumina custom method.
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