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The programs to extract the core dictionaries (Steps 4 7), to construct the semantic map (as described above), and to analyze the results, were custom implemented using a combination of GNU C (GCC 4.2) and Matlab along with their standard libraries and functions (all code is available upon request).
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The MRI stacks were processed with a custom toolbox, implemented using open source software.
For each microwire, 2 3 different recording sessions were analyzed with open source algorithms (http://chronux.org) and custom algorithms implemented in Matlab to explore their time-frequency properties.
We conducted single marker and haplotype TDT association analysis using a custom script implemented in R statistical software and based on Transmit [14], and the equivalent FBAT approach [15] for comparison of the results.
The feature selection was completed using a custom script implemented in SAS.
Jarvis Patrick clustering was performed with a custom program implemented in C++.
The resulting data was summarized using custom scripts implemented in the R statistics package [ 49].
ARIs, as an estimate of APD, 9, 10, 11 were calculated semiautomatically by means of the Wyatt method using automated custom algorithms implemented off-line (MATLAB, MathWorks).
Medical problems are represented using an information model currently associated with the Clinical Information System in use at our institution: the Clinical Event model [ 79], instead of the custom model implemented in XML and described in a previous publication [ 68].
Mean beta values reported for clusters identified in the group-level data were extracted from the SPM2 data files using custom scripts implemented in MATLAB (The MATHWORKS Inc., Natick, MA).
} Then, a custom algorithm implemented in JAVA is used to count the number of common AGROVOC URIs between the AGRIS entity and web URLs returned by the previous query, storing the top 20 most relevant web resources in the Recommender Database.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com