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The raw data (FASTQ files) were processed using a custom designed sequence processing tool, Altius.
For lateral orientation, this represents substantial improvement over a previously demonstrated protocol, where standardized anteroposterior orientation of embryos could only be achieved in-silico using a custom designed image processing pipeline [ 10].
We demonstrate use of restricted access media with reversed phase functionality (RAM-RP) for analysis of low molecular weight proteins and peptides in mouse serum (75 μl) using a custom designed modular automated processing system (MAPS).
To provide tracking signals in real-time, the TSLO image acquisition and processing was custom designed and uses the combined functionality of a GPU (GeForce GTX 560) and a Field-Programmable Gate Array (FPGA) board (Virtex 5, Xilinx).
The application functionality is designed around Mathematica's in-built image processing capability with custom designed functions specialized at segmenting greyscale microscope images.
Multiple images were taken for each condition and stitched together using a custom designed plugin for the open source image processing package Fiji (Schindelin et al., 2012).
This pipeline is different from other available pipelines as it has custom designed tools for identification of novel miRNAs that involve pre-processing of the sequences, an exhaustive elimination pipeline, folding and filtering to get novel predictions.
A custom designed, user-friendly computer program has been incorporated for large-scale data processing and report generation.
"All of the costumes were custom designed".
A. Every piece of furniture is custom designed.
XPS spectra were obtained by using a custom designed spectrometer.
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